Nextflow

Useful links

• Official documentation
• Training portal

Part 1

In part 1 we’ll start with a conceptual overview, getting to know how to use Nextflow from the command line, and learning to create an empty workflow.

• Intro slides
• Making a basic workflow

Part 2

In part 2 we’ll finish converting our example workflow bash script into a Nextflow pipeline.

• Building the example pipeline</a
• Repository for complete workflow